GenerateDecoy with multiple transcriptome fasta files at the -t argument

[Norbittner]

Hi

I'm stuck at the moment to generate a decoy file from two transcriptome fasta files (A. thaliana cDna and ncrna from Ensemblplants). I tried several ways of putting both files after the -t argument (like , or ; or using -t two times) but nothing worked. I guess there is a super easy solution for that. Or can i map on the level of Salmon to two indices ? Many thanks in advance.