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20 hours ago •
CDAT
CDAT
running autot_title with setbgoutputdimensions leads to seg fault
doutriaux1@maryam:[/git/uvcdat]:[fix_Autot*]:[2139]> git diff
diff --git a/testing/vcs/test_vcs_autot_axis_titles.py b/testing/vcs/test_vcs_autot_axis_titles.py
index 8dfacdb..afd64de 100644
--- a/testing/vcs/test_vcs_autot_axis_titles.py
+++ b/testing/vcs/test_vcs_autot_axis_titles.py
@@ -32,7 +32,7 @@ f = cdms2.open(vcs.sample_data + "/" + testConfig[plot][0])
s = f(testConfig[plot][1])
x = vcs.init(bg=bg, geometry=(xSize, ySize))
-x.setbgoutputdimensions(xSize,ySize)
+x.setantialiasing(0)
# graphics method
if (plot.find('boxfill') != -1):
@@ -47,9 +47,9 @@ else:
print "Invalid plot"
sys.exit(13)
-x.setantialiasing(0)
+x.setbgoutputdimensions(xSize,ySize)
x.drawlogooff()
-x.plot(s, gm, ratio="autot")
+x.plot(s, gm, ratio="autot", bg=bg)
name = "test_autot_axis_titles_" + plot[2:] + "_" + x_over_y + "_" + str(bg) + ".png"
x.png(name)
running script:
"/usr/local/uvcdat/2.4.1rc/bin/python" "/git/uvcdat/testing/vcs/test_vcs_autot_axis_titles.py" "/Users/doutriaux1/build/uvcdat-testdata/baselines/vcs/test_vcs_autot_axis_titles_boxfill_0.5.png" "background" "a_boxfill" "0.5"
ERROR: In /Users/doutriaux1/build/build/VTK/Rendering/OpenGL/vtkOpenGLDisplayListPainter.cxx, line 188
vtkOpenGLDisplayListPainter (0x7fb1de639cb0): failed after RenderInternal 1 OpenGL errors detected
0 : (1285) Out of memory
ERROR: In /Users/doutriaux1/build/build/VTK/Rendering/OpenGL/vtkOpenGLDisplayListPainter.cxx, line 188
vtkOpenGLDisplayListPainter (0x7fb1de68cd00): failed after RenderInternal 1 OpenGL errors detected
0 : (1285) Out of memory
ERROR: In /Users/doutriaux1/build/build/VTK/Rendering/OpenGL/vtkOpenGLDisplayListPainter.cxx, line 188
vtkOpenGLDisplayListPainter (0x7fb1de438890): failed after RenderInternal 1 OpenGL errors detected
0 : (1285) Out of memory
ERROR: In /Users/doutriaux1/build/build/VTK/Rendering/OpenGL/vtkOpenGLPolyDataMapper2D.cxx, line 442
vtkOpenGLPolyDataMapper2D (0x7fb1dbde4f90): failed after RenderOverlay 1 OpenGL errors detected
0 : (1285) Out of memory
ERROR: In /Users/doutriaux1/build/build/VTK/Rendering/OpenGL/vtkOpenGLDisplayListPainter.cxx, line 188
vtkOpenGLDisplayListPainter (0x7fb1de639cb0): failed after RenderInternal 1 OpenGL errors detected
0 : (1285) Out of memory
ERROR: In /Users/doutriaux1/build/build/VTK/Rendering/OpenGL/vtkOpenGLDisplayListPainter.cxx, line 188
vtkOpenGLDisplayListPainter (0x7fb1de438890): failed after RenderInternal 1 OpenGL errors detected
0 : (1285) Out of memory
Segmentation fault: 11
apple bug report:
Process: Python [21653]
Path: /usr/local/uvcdat/2.4.1rc/Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python
Identifier: org.python.python
Version: 2.7.11 (2.7.11)
Code Type: X86-64 (Native)
Parent Process: bash [6361]
Responsible: Terminal [473]
User ID: 45773
Date/Time: 2016-04-18 07:41:29.289 -0700
OS Version: Mac OS X 10.11.3 (15D21)
Report Version: 11
Anonymous UUID: 15C0DA84-7E18-76E3-62E5-0C87609E8164
Sleep/Wake UUID: EA5587EF-A4F1-4D08-9A3A-6B1EE42A6865
Time Awake Since Boot: 1400000 seconds
Time Since Wake: 530 seconds
System Integrity Protection: disabled
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00000002e6287000
VM Regions Near 0x2e6287000:
MALLOC_LARGE 00000002bd78d000-00000002e6287000 [651.0M] rw-/rwx SM=PRV
-->
STACK GUARD 0000700000000000-0000700000001000 [ 4K] ---/rwx SM=NUL stack guard for thread 1
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libsystem_platform.dylib 0x00007fff9b475f49 _platform_memmove$VARIANT$Haswell + 41
1 libvtkRenderingCore-7.1.1.dylib 0x000000011591d8f8 vtkWindowToImageFilter::RequestData(vtkInformation*, vtkInformationVector**, vtkInformationVector*) + 6616 (vtkWindowToImageFilter.cxx:523)
2 libvtkRenderingCore-7.1.1.dylib 0x000000011591be89 vtkWindowToImageFilter::ProcessRequest(vtkInformation*, vtkInformationVector**, vtkInformationVector*) + 89 (vtkWindowToImageFilter.cxx:235)
3 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112c814c4 vtkExecutive::CallAlgorithm(vtkInformation*, int, vtkInformationVector**, vtkInformationVector*) + 164 (vtkExecutive.cxx:775)
4 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112c75cad vtkDemandDrivenPipeline::ExecuteData(vtkInformation*, vtkInformationVector**, vtkInformationVector*) + 141 (vtkDemandDrivenPipeline.cxx:491)
5 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112c6cf6f vtkCompositeDataPipeline::ExecuteData(vtkInformation*, vtkInformationVector**, vtkInformationVector*) + 1807 (vtkCompositeDataPipeline.cxx:178)
6 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112c74fff vtkDemandDrivenPipeline::ProcessRequest(vtkInformation*, vtkInformationVector**, vtkInformationVector*) + 1359 (vtkDemandDrivenPipeline.cxx:274)
7 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112cca5f2 vtkStreamingDemandDrivenPipeline::ProcessRequest(vtkInformation*, vtkInformationVector**, vtkInformationVector*) + 2834 (vtkStreamingDemandDrivenPipeline.cxx:328)
8 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112c75a6f vtkDemandDrivenPipeline::UpdateData(int) + 1087 (vtkDemandDrivenPipeline.cxx:441)
9 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112cca9d8 vtkStreamingDemandDrivenPipeline::Update(int, vtkInformationVector*) + 424 (vtkStreamingDemandDrivenPipeline.cxx:403)
10 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112cca826 vtkStreamingDemandDrivenPipeline::Update(int) + 38 (vtkStreamingDemandDrivenPipeline.cxx:365)
11 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112c609f2 vtkAlgorithm::Update(int) + 50 (vtkAlgorithm.cxx:1457)
12 libvtkCommonExecutionModel-7.1.1.dylib 0x0000000112c609b8 vtkAlgorithm::Update() + 72 (vtkAlgorithm.cxx:1451)
13 libvtkCommonExecutionModelPython27D-7.1.1.dylib 0x0000000112b758b8 PyvtkAlgorithm_Update_s2(_object*, _object*) + 152 (vtkAlgorithmPython.cxx:2243)
14 libvtkCommonExecutionModelPython27D-7.1.1.dylib 0x0000000112b72732 PyvtkAlgorithm_Update(_object*, _object*) + 114 (vtkAlgorithmPython.cxx:2329)
15 org.python.python 0x0000000109c99511 PyEval_EvalFrameEx + 27905 (ceval.c:4350)
16 org.python.python 0x0000000109c9251a PyEval_EvalCodeEx + 1690 (ceval.c:3582)
17 org.python.python 0x0000000109c1e1bc function_call + 364 (funcobject.c:526)
18 org.python.python 0x0000000109bf84b3 PyObject_Call + 99 (abstract.c:2546)
19 org.python.python 0x0000000109c99c7c PyEval_EvalFrameEx + 29804 (ceval.c:4663)
20 org.python.python 0x0000000109c9251a PyEval_EvalCodeEx + 1690 (ceval.c:3582)
21 org.python.python 0x0000000109c9de26 fast_function + 118 (ceval.c:4450)
22 org.python.python 0x0000000109c993a8 PyEval_EvalFrameEx + 27544 (ceval.c:4371)
23 org.python.python 0x0000000109c9251a PyEval_EvalCodeEx + 1690 (ceval.c:3582)
24 org.python.python 0x0000000109c91e76 PyEval_EvalCode + 54 (ceval.c:669)
25 org.python.python 0x0000000109cbfc14 PyRun_FileExFlags + 164 (pythonrun.c:1370)
26 org.python.python 0x0000000109cbf74a PyRun_SimpleFileExFlags + 698 (pythonrun.c:948)
27 org.python.python 0x0000000109cd54f2 Py_Main + 3186 (main.c:643)
28 libdyld.dylib 0x00007fff8fb995ad start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff8f1826de __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff90495729 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff90493365 start_wqthread + 13
Thread 2:: Dispatch queue: com.apple.libdispatch-manager
0 libsystem_kernel.dylib 0x00007fff8f182ff6 kevent_qos + 10
1 libdispatch.dylib 0x00007fff9ce08099 _dispatch_mgr_invoke + 216
2 libdispatch.dylib 0x00007fff9ce07d01 _dispatch_mgr_thread + 52
Thread 3:
0 libsystem_kernel.dylib 0x00007fff8f1826de __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff90495729 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff90493365 start_wqthread + 13
Thread 4:
0 libsystem_kernel.dylib 0x00007fff8f1826de __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff90495729 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff90493365 start_wqthread + 13
Thread 5:
0 libsystem_kernel.dylib 0x00007fff8f1826de __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff90495729 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff90493365 start_wqthread + 13
Thread 6:
0 libsystem_kernel.dylib 0x00007fff8f1826de __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff90495729 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff90493365 start_wqthread + 13
Thread 7:
0 libsystem_kernel.dylib 0x00007fff8f1826de __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff90495729 _pthread_wqthread + 1283
2 libsystem_pthread.dylib 0x00007fff90493365 start_wqthread + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x00000001bd75c980 rbx: 0x000000011a2d78d0 rcx: 0x0000000000005b00 rdx: 0x0000000000015180
rdi: 0x00000001bd76c000 rsi: 0x00000002e6287000 rbp: 0x00007fff5601a800 rsp: 0x00007fff5601a800
r8: 0x0000000000000000 r9: 0x0000000000000870 r10: 0x00007fff5601a6d8 r11: 0xfffffffed74e5000
r12: 0x0000000000000000 r13: 0x00007fb1dbc07660 r14: 0x0000000000000000 r15: 0x00007fb1dbc639c0
rip: 0x00007fff9b475f49 rfl: 0x0000000000010202 cr2: 0x00000002e6287000
Logical CPU: 0
Error Code: 0x00000004
Trap Number: 14
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0x7fff9d654000 - 0x7fff9d6f8fff com.apple.Bluetooth (4.4.3 - 4.4.3f4) <B5F46DA5-EAE8-3F79-864D-1423C61C0A69> /System/Library/Frameworks/IOBluetooth.framework/Versions/A/IOBluetooth
0x7fff9d702000 - 0x7fff9d736ff7 com.apple.CoreVideo (1.8 - 191.2) <88D903C8-E608-320E-8ACD-11E5B3003C18> /System/Library/Frameworks/CoreVideo.framework/Versions/A/CoreVideo
0x7fff9d737000 - 0x7fff9d7ccfff com.apple.ink.framework (10.9 - 214) <6B573126-A6E9-357F-B36A-AA5BDC0BEAF8> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink
0x7fff9d7cd000 - 0x7fff9d7d8fff libGPUSupportMercury.dylib (12.0.40.6) <6061FB76-565E-3E11-B659-50827DFB0BDE> /System/Library/PrivateFrameworks/GPUSupport.framework/Versions/A/Libraries/libGPUSupportMercury.dylib
0x7fff9d941000 - 0x7fff9d990ff7 com.apple.opencl (2.6.9 - 2.6.9) <27643341-DC6F-3C2F-8B8B-637061979BF3> /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff9d9d1000 - 0x7fff9dd25ff7 com.apple.Foundation (6.9 - 1256.1) <66106CC9-9D97-3846-88D8-4BF6BB508296> /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
0x7fff9dd26000 - 0x7fff9dd89fff libAVFAudio.dylib (161.2) <C42EF0ED-56B2-387F-B188-C42FB8A1B7AB> /System/Library/Frameworks/AVFoundation.framework/Versions/A/Resources/libAVFAudio.dylib
0x7fff9dd8a000 - 0x7fff9de98ff3 com.apple.desktopservices (1.10 - 1.10) <0BAED9FA-EFA5-3DA0-8715-043FD2400B77> /System/Library/PrivateFrameworks/DesktopServicesPriv.framework/Versions/A/DesktopServicesPriv
0x7fff9df03000 - 0x7fff9e0a9ff7 com.apple.audio.toolbox.AudioToolbox (1.13 - 1.13) <F912765D-88ED-3324-B512-3778A8CE878B> /System/Library/Frameworks/AudioToolbox.framework/Versions/A/AudioToolbox
0x7fff9e0ec000 - 0x7fff9e102ff7 libLinearAlgebra.dylib (1159) <FA316609-9851-3C5C-AF46-685A25768D45> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLinearAlgebra.dylib
0x7fff9e2aa000 - 0x7fff9e2ecff7 com.apple.Metal (55.2.8 - 55.2.8) <D4D7AC6F-7B31-3D94-B4B1-587EC2856CDB> /System/Library/Frameworks/Metal.framework/Versions/A/Metal
0x7fff9e61d000 - 0x7fff9e998ffb com.apple.VideoToolbox (1.0 - 1731.15.33) <33AED54A-87AE-330F-BAAD-FB8389C3E686> /System/Library/Frameworks/VideoToolbox.framework/Versions/A/VideoToolbox
0x7fff9e999000 - 0x7fff9e9affff com.apple.CoreMediaAuthoring (2.2 - 953) <D74307B6-EC7E-3E5F-B2CF-7CE7A183F0F0> /System/Library/PrivateFrameworks/CoreMediaAuthoring.framework/Versions/A/CoreMediaAuthoring
0x7fff9e9b0000 - 0x7fff9e9b6ff7 com.apple.speech.recognition.framework (5.1.1 - 5.1.1) <FA5CB89A-2BFE-38CC-B1A3-E48792CD898C> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition
0x7fff9ebf3000 - 0x7fff9ebfefff com.apple.CrashReporterSupport (10.11 - 717) <474544AD-1199-3ECC-90E5-071847BA72C6> /System/Library/PrivateFrameworks/CrashReporterSupport.framework/Versions/A/CrashReporterSupport
0x7fff9ec1f000 - 0x7fff9ecacfff libsystem_c.dylib (1082.20.4) <EAB38A6C-8671-3B13-B500-90EC1B912063> /usr/lib/system/libsystem_c.dylib
0x7fff9f7d9000 - 0x7fff9f813ff7 com.apple.DebugSymbols (132 - 132) <BDF57386-2881-35BD-9310-36904C764E93> /System/Library/PrivateFrameworks/DebugSymbols.framework/Versions/A/DebugSymbols
0x7fff9f854000 - 0x7fff9f882ff7 com.apple.DictionaryServices (1.2 - 250) <D9AB6B92-CAF5-3EC2-8D07-639B42DA1CB9> /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/DictionaryServices.framework/Versions/A/DictionaryServices
0x7fff9f8cb000 - 0x7fff9f8ccfff libDiagnosticMessagesClient.dylib (100) <4243B6B4-21E9-355B-9C5A-95A216233B96> /usr/lib/libDiagnosticMessagesClient.dylib
0x7fff9f8cd000 - 0x7fff9f8f2ff7 libPng.dylib (1442) <C13F5341-C342-3733-AF4C-434F2D8FF0A8> /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib
0x7fff9f8f6000 - 0x7fff9f901fff libkxld.dylib (3248.30.4) <BAA3DDEC-AD81-3C29-AECC-59E4AD114D3C> /usr/lib/system/libkxld.dylib
0x7fff9f924000 - 0x7fff9f94dff7 libxslt.1.dylib (14.1) <AE86E275-499F-3D4F-8433-142186D383CB> /usr/lib/libxslt.1.dylib
0x7fffa0d4a000 - 0x7fffa0d52ffb libsystem_dnssd.dylib (625.20.4) <945B5FB1-DA91-3D45-A961-A8FAD53C1E7E> /usr/lib/system/libsystem_dnssd.dylib
0x7fffa0e88000 - 0x7fffa0e90ff7 libcldcpuengine.dylib (2.6.4.1) <5FFEDBEF-2EFE-3F91-BABC-1E73B28487A2> /System/Library/Frameworks/OpenCL.framework/Versions/A/Libraries/libcldcpuengine.dylib
0x7fffa0e91000 - 0x7fffa0f27fff com.apple.ColorSync (4.9.0 - 4.9.0) <8BB8DF19-C24F-39F8-8B90-AD186D74587C> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync
0x7fffa0f28000 - 0x7fffa0ffeff7 com.apple.DiskImagesFramework (10.11.3 - 417.2) <25BBE20C-E92B-360F-A326-093B61CC7B5E> /System/Library/PrivateFrameworks/DiskImages.framework/Versions/A/DiskImages
0x7fffa116a000 - 0x7fffa116bfff com.apple.TrustEvaluationAgent (2.0 - 25) <0239494E-FEFE-39BC-9FC7-E251BA5128F1> /System/Library/PrivateFrameworks/TrustEvaluationAgent.framework/Versions/A/TrustEvaluationAgent
0x7fffa12f0000 - 0x7fffa1397fff com.apple.LanguageModeling (1.0 - 1) <E1E4091D-6CAB-36E0-A206-AAADE69791DC> /System/Library/PrivateFrameworks/LanguageModeling.framework/Versions/A/LanguageModeling
0x7fffa13e6000 - 0x7fffa13f4fff com.apple.opengl (12.0.40 - 12.0.40) <D37D88AE-0731-3105-99AB-984DA9B9BCE6> /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fffa1d2a000 - 0x7fffa1d31ff7 libcompiler_rt.dylib (62) <D3C4AB40-23B4-3BC6-8C38-5B8758D14E80> /usr/lib/system/libcompiler_rt.dylib
0x7fffa1d32000 - 0x7fffa1d6cfff com.apple.QD (3.12 - 302) <3F36A108-C557-353A-A3F7-80DDCB82BB37> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 8
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 71191148
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=438.8M resident=0K(0%) swapped_out_or_unallocated=438.8M(100%)
Writable regions: Total=7.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=7.3G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Activity Tracing 2048K 2
CG image 4K 2
CG shared images 208K 6
CoreAnimation 40K 5
CoreUI image data 76K 2
CoreUI image file 160K 3
Dispatch continuations 8192K 2
IOKit 622.0M 60
Kernel Alloc Once 8K 3
MALLOC 2.1G 42
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 3.9G 2 reserved VM address space (unallocated)
STACK GUARD 56.0M 9
Stack 11.1M 9
VM_ALLOCATE 24.0M 61
__DATA 90.2M 525
__GLSLBUILTINS 2588K 2
__IMAGE 528K 2
__LINKEDIT 149.4M 282
__TEXT 289.5M 506
__UNICODE 552K 2
mapped file 39.4M 10
shared memory 612.4M 54
=========== ======= =======
TOTAL 7.8G 1575
TOTAL, minus reserved VM space 4.0G 1575
Model: MacBookAir6,2, BootROM MBA61.0099.B21, 2 processors, Intel Core i7, 1.7 GHz, 8 GB, SMC 2.13f15
Graphics: Intel HD Graphics 5000, Intel HD Graphics 5000, Built-In
Memory Module: BANK 0/DIMM0, 4 GB, DDR3, 1600 MHz, 0x80AD, 0x483943434E4E4E384A544D4C41522D4E544D
Memory Module: BANK 1/DIMM0, 4 GB, DDR3, 1600 MHz, 0x80AD, 0x483943434E4E4E384A544D4C41522D4E544D
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x117), Broadcom BCM43xx 1.0 (7.21.94.136.1a1)
Bluetooth: Version 4.4.3f4 16616, 3 services, 19 devices, 1 incoming serial ports
Network Service: Thunderbolt Ethernet, Ethernet, en3
PCI Card: Apple 57762-A0, Ethernet Controller, Thunderbolt@195,0,0
Serial ATA Device: APPLE SSD SM0512F, 500.28 GB
USB Device: USB 3.0 Bus
USB Device: BRCM20702 Hub
USB Device: Bluetooth USB Host Controller
Thunderbolt Bus: MacBook Air, Apple Inc., 23.6
Thunderbolt Device: Thunderbolt to Gigabit Ethernet Adapter, Apple Inc., 1, 5.5
Migrated from: https://github.com/UV-CDAT/uvcdat/issues/1931
