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Public Workflows at GNPS

Results 104 GNPS_Workflows issues
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Bumps [joblib](https://github.com/joblib/joblib) from 1.0.1 to 1.2.0. Changelog Sourced from joblib's changelog. Release 1.2.0 Fix a security issue where eval(pre_dispatch) could potentially run arbitrary code. Now only basic numerics are supported....

dependencies

**Describe the bug** I have problems in the data processing. When I try with mzML files I get the error: '''str' object has no attribute 'tag'''. When I try with...

**Is your feature request related to a problem? Please describe.** My feature request is not related to any problem, just a suggestion **Describe the solution you'd like** I would like...

enhancement

**Describe the bug** Running MS2LDA_MOTIFDB on a FEATURE-BASED-MOLECULAR-NETWORKING (version release_28.2) creates an error **To Reproduce** Steps/Task to reproduce the behavior: 1. Go to 'https://gnps.ucsd.edu/ProteoSAFe/status.jsp?task=d207c3a831264d61810ad69ac09b14e9' 2. Click on 'Analyze with MS2LDA'...

Bumps [lxml](https://github.com/lxml/lxml) from 4.6.2 to 4.9.1. Changelog Sourced from lxml's changelog. 4.9.1 (2022-07-01) Bugs fixed A crash was resolved when using iterwalk() (or canonicalize()) after parsing certain incorrect input. Note...

dependencies

Bumps [numpy](https://github.com/numpy/numpy) from 1.20.1 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...

dependencies

Hi, I have checked the documentation but couldn't find if there is an API for Classical Molecular Networking that users can access from their system with command line. Is there...

enhancement

The Qemistree is a great tool and I enjoyed using it immensely. However, I am currently having some issues using the Qemistree with large dataset I managed to get the...