Chris Broz
Chris Broz
The problem comes down to one of misalignment between spyglass and NWB, and how spyglass can change to accommodate these cases. The potential solutions we discussed included... #### 1. Decoupling...
Also discussed: an overflow restriction field as a blob. - Pro: preserves query-ability in majority of cases - Con: requires conditional fetch during export proper [discussion of varchar limits](https://stackoverflow.com/questions/13506832/what-is-the-mysql-varchar-max-size) ~65k
Hi @rpswenson - what version of conda are you using? ```bash conda --version ```
At the time of the last release, `moseq-gpu` was not an available option [here](https://github.com/LorenFrankLab/spyglass/blob/75ad067c1254350038507767cfba23a685abdc17/pyproject.toml#L63) What happens if you run this pip install from a local git clone? ```bash git clone...
This looks to be an incompatibility between your `jax` and `jaxlib` versions, which isn't something I can really adjust from within spyglass. We require pip to install `jax[cuda12]`. That should...
@samuelbray32 - Do you have any recommendations for versions of various `jax*` packages?
... so about dockerizing subpackages ... --- Doing some digging on moseq's git history, I found - [This commit](https://github.com/dattalab/keypoint-moseq/commit/8b86dd3089344dbfc2fd96cdf765682d57764d3e) - As part of [this merge](https://github.com/dattalab/keypoint-moseq/commit/0800b57cdd5eea52a016c8a5b6d3f195ff859413) (non-PR'd) - Minor mention of...
How do you want to tackle the uniqueness issue?
No, I think this was an excess of caution assumption wanting to avoid exporting whole tables. Seems safe to remove In a recent shell script there was a where clause...
### Replication I wasn't able to replicate this error. First, I ran the create volume and build commands present in the notebook. ```bash docker volume create dj-vol docker run --name...