Burcham Lab at UTK

Has anyone fixed this issue? I am also getting "UserWarning: No descriptions were found for your id's. Does this GT2_Glycos_transf_2 look like an id from dbcan_description warnings.warn(" It seems to...

> Hi Laura, did you ever get this fixed?

Hi @Somebodyatthdoor , the warning shows up for me during the annotate step. Distill looks to work fine outside of cazy. I also have a lot of zeros but I...

@Somebodyatthdoor, unfortunately I never got improved dbCan results but the other databases worked fine. All the best, Zachary M. Burcham, PhD Research Assistant Professor Department of Microbiology University of Tennessee-Knoxville...

I am giving it communities of co-occuring pairs. It gives n/a for about half my communities. I do not specify a growth medium. This is my command: smetana *.xml -c...

I can send a 2 model community if that helps.

Thanks, Daniel. Here is a Google Drive to 2 models I used as a community that can't calculate the MIP. https://drive.google.com/drive/folders/1-hhxj8YojrdHeoBTXbIL90YOyxrSFfoh?usp=sharing

Thank you @cdanielmachado , that seemed to fix the problem with MIP calculation. I am having an issue with a few models now working with MRO calculation now but that...