Buglakova Alyona
Buglakova Alyona
Hello, Thank you for a great library! I'm using CPD to do nonrigid registration of 3D point clouds. First I register them rigidly, so they match pretty well at the...
When I run the network prediction, the result has strong tiling artifacts. I use quite big halo, but it doesn't help. I encountered this before when using U-Net that wasn't...
To get the correct segmentation it's important that the objects on the new image are approximately the same size as in the training data. This doesn't necessarily mean that the...
Hello, When I install plantseg with the command from documentation, it doesn't automatically install Napari's backend, adding `pyqt` explicitly helped: `mamba create -n plant-seg -c pytorch -c nvidia -c conda-forge...
Currently during prediction overlapping parts of tiles are just cropped. Would be useful to have different modes for dealing with it, for example, add also averaging and averaging based on...
Hello. It is hard to understand from code, what is the difference between `predict_with_tiling` and `predict_with_padding` and what parameters mean. From searching the repo, trying things and talking to Constantine...
Hello, While using the proofreading tool, the person helping me with annotation encounters the following problem: Marking with the brush only works half of the time. I am guessing that...
Hello, I would like to use the proofreading function and it looks like the split/merge would make it much faster, because it actually works in 3D. However, there's no way...