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Error in GDCprepare: Allele-specific Copy Number Segment - samples duplicated
Hi,
Thanks for a very useful package. Great work:) I have just tried (using v2.32.0
) to download the allele-specific copy number segments from TCGA, as exemplified in the code examples provided here.
However, testing this returns the following error (also for other cohorts, not only TCGA-ACC
):
Error in GDCprepare(query) :
There are samples duplicated. We will not be able to prepare it
Would be great to be able to get this function to work properly ;)
kind regards, Sigve