tidysq
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BioGenies
tidy processing of biological sequences in R
We should implement `safe_mode` for all input functions. We have it done or scheduled for `sq()` and `read_fasta()`, so only `import_sq()` is left unsafe.
For a long time, `summary.sq()` was simply a call to `summary.default()`. We can do so much better and provide a valuable insight into `sq` objects. However, first and foremost, we...
Whenever we call `bite()` with indices like `7:32`, we access every element separately, that is, `7`, `8`, `9`... Computing all these bit and byte indices and shifting three/five bits at...
Actually `Sequence::const_reverse_iterator` would be used in `reverse()`. Right now it has to be iterated over manually. Also, it's just a useful thing to have.