mulled icon indicating copy to clipboard operation
mulled copied to clipboard

Add minfi Docker container.

Open bgruening opened this issue 8 years ago • 8 comments

This PR will create a Docker container for minfi.

ping @nturaga

bgruening avatar May 04 '16 13:05 bgruening

@bgruening Cheers! Will look at this today.

nturaga avatar May 04 '16 13:05 nturaga

libGLU.so.1: cannot open shared object file: No such file or directory is the relevant message in the build log. Does this belong to a known package in the repository?

thriqon avatar May 04 '16 14:05 thriqon

Oh too bad. libglu belongs to the xserver. I don't think we have a dependency in bioconda for it.

bgruening avatar May 04 '16 14:05 bgruening

Its the same error we've had on the bioconda repo,

SERR error: unable to load shared object '/usr/local/lib/R/library/rgl/libs/rgl.so':

The next release version of minfi, apparently will not have this as a dependency. (source: Author of minfi)

nturaga avatar May 04 '16 14:05 nturaga

@nturaga are you talking about 1.18.0. This was released a few days ago. Do you mind updating the conda package?

bgruening avatar May 08 '16 11:05 bgruening

Will do @bgruening

nturaga avatar May 09 '16 15:05 nturaga

@bgruening This should hopefully fix things, https://github.com/bioconda/bioconda-recipes/pull/1513

nturaga avatar May 09 '16 20:05 nturaga

Let's see I fear that you need to update the dependencies as well :(

bgruening avatar May 09 '16 20:05 bgruening