CodonAdaptationIndex icon indicating copy to clipboard operation
CodonAdaptationIndex copied to clipboard

Documentation Request for Using RSCU param with `python_codon_tables`

Open HarryMWinters opened this issue 5 years ago • 0 comments

Just like it sounds. It'd be great to see how to use the RSCU param in the docs. In particular how to integrate it with the value from python_codon_tables.get_codons_table().

Most of the examples are using a reference genome and I get key errors when I try:

RSCU = python_codon_tables.get_codons_table("h_sapiens")
initial_grade = CAI.CAI(initial_seq, RSCUs=RSCU)

HarryMWinters avatar Nov 27 '19 00:11 HarryMWinters