Benchmark-Models-PEtab
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Labeling of preequilibration and simulation conditions
Can one use more informative names than model1_data{1,2,3}?
One can. But would require a lot of manual work as some models have hundreds of simulation conditions...
Agreed :/ If it is as simple as for the Zheng_PNAS2012 (done), Weber_BMC2015 (not done) models to distinguish preequilibration and simulation condition, it might be good to do so. But in general maybe not feasible.
I also think that more informative labels would be helpful. For models which are in D2D, the respective dataset names could be used as a basis. This would also be a good basis for the datasetID.