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Additional model: Casaletto, PNAS 2019

Open LoosC opened this issue 6 years ago • 6 comments

A new model in the d2d examples, potentially interesting to also implement it here? https://github.com/Data2Dynamics/d2d/tree/master/arFramework3/Examples/Casaletto_PNAS2019

LoosC avatar Mar 19 '19 18:03 LoosC

Let's see how far the d2d PEtab export will develop during the INCOME hackathon...

dweindl avatar Mar 19 '19 21:03 dweindl

Do you know from which paper it is? Can't find any PNAS paper from 2019 with that author...

LeonardSchmiester avatar Mar 20 '19 11:03 LeonardSchmiester

no, maybe its not published yet?

LoosC avatar Mar 20 '19 11:03 LoosC

Here it is: https://www.pnas.org/content/early/2019/03/20/1819085116.short?rss=1

LeonardSchmiester avatar Mar 24 '19 11:03 LeonardSchmiester

@elbaraim you worked on this model, right?! The columns in the measurement file are mixed up. E.g. measurement values are in the simulationConditionId column etc.

LeonardSchmiester avatar Jan 20 '20 09:01 LeonardSchmiester

The model is also in D2D I think. Maybe we can also try the D2D export here.

LeonardSchmiester avatar Mar 10 '20 12:03 LeonardSchmiester