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Published 20 hours ago • verified publisher icon BenLangmead

referenced sra are not found on FTP server

Open vlad-belogrudov opened this issue 11 years ago • 2 comments

Sample invocation of the tool with e.coli does not work because sra files mentioned in manifest don't exist any longer

vlad-belogrudov avatar Nov 11 '13 11:11 vlad-belogrudov

The link is now: ftp://ftp-trace.ncbi.nih.gov/sra/sra-instant/reads/ByRun/sra/SRR/SRR014/SRR014475/SRR014475.sra

gecgooden avatar Dec 09 '13 07:12 gecgooden

Hi George,

Thank you for letting us know. SRA files are getting relocating much faster than our release schedule. We usually fix them every time we have a new release.

thanks, Val

On 12/09/2013 02:06 AM, George Gooden wrote:

The link is now: ftp://ftp-trace.ncbi.nih.gov/sra/sra-instant/reads/ByRun/sra/SRR/SRR014/SRR014475/SRR014475.sra

— Reply to this email directly or view it on GitHub https://github.com/BenLangmead/crossbow/issues/5#issuecomment-30109184.

val-antonescu avatar Dec 11 '13 14:12 val-antonescu