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This repository includes the official project of TransUNet, presented in our paper: TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation.

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when I run "python test.py --dataset Synapse --vit_name R50-ViT-B_16" but ,let me said, it raises below error : "Traceback (most recent call last): File "test.py", line 122, in net.load_state_dict(torch.load(snapshot)) File...

Hello, someone help me please to prepare the training data. thank you.

Hello, what do I need to change to use 2d slices for testing?

Traceback (most recent call last): File "D:\CondaProjects\TransUNet-main\TransUNet\test.py", line 156, in inference(args, net, test_save_path) File "D:\CondaProjects\TransUNet-main\TransUNet\test.py", line 60, in inference metric_i = test_single_volume(image, label, model, classes=args.num_classes, File "D:\CondaProjects\TransUNet-main\TransUNet\utils.py", line 87, in...

Hello! everyone! Cound you please send the preprocessed data set that can run the code to my mailbox? Thank you! [email protected]

Hello everyone! I am getting the error when try to make a prediction: ``` RuntimeError Traceback (most recent call last) Input In [10], in () 4 x, y = x.to(device),...

RuntimeError: Given groups=1, weight of size [64, 3, 7, 7], expected input[1, 1000, 512, 512] to have 3 channels, but got 1000 channels instead

First of all, thank you for your contribution.I sent an email to you before and also downloaded your data set. I wanted to see your original data image, so I...

I've received your dataset, it very helpful, thanks a lot. But I found that some training data slices don't have masks, like 'case0005_slice000.npz' to 'case0005_slice022.npz', I think these slices may...

My data is 3D, I want to train 3D model.Does it ok?