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Segmentation fault on example dataset
I am trying to run clust using ExampleData/1_RawData. I have the following directory structure:
ls
MapIDs.txt Normalisation.txt Replicates.txt data
ls data
X1.txt X2.txt X3.txt
I ran clust using the command clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt
And I get the following error:
/===========================================================================\
| Clust |
| (Optimised consensus clustering of multiple heterogenous datasets) |
| Python package version 1.18.0 (2022) Basel Abu-Jamous |
+---------------------------------------------------------------------------+
| Analysis started at: Tuesday 07 May 2024 (13:23:16) |
| 1. Reading dataset(s) |
| 2. Data pre-processing |
| - Flat expression profiles filtered out (default in v1.7.0+). |
| To switch it off, use the --no-fil-flat option (not recommended). |
| Check https://github.com/BaselAbujamous/clust for details. |
| 3. Seed clusters production (the Bi-CoPaM method) |
| 10% |
| 20%
zsh: segmentation fault clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt
Any idea what may be going on here?