genomation Adding filtering capabilities for bam data (e.g. take only reads from the

Adding filtering capabilities for bam data (e.g. take only reads from the - strand)

Open frenkiboy opened this issue 9 years ago • 1 comments

Mar 11 '15 11:03 frenkiboy

SummarizeOverlaps can take a an arbitrary function which runs on reads before doing the counting - maybe something like this can be implemented in ScoreMatrixList - if we want to count only 5' ends of the reads maybe?

Mar 31 '17 07:03 frenkiboy

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Adding filtering capabilities for bam data (e.g. take only reads from the - strand)

genomation
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