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BedGraph support

Open fgualdr opened this issue 3 years ago • 0 comments

Hi,

I am trying to use generation and in particular the ScoreMatrix/ScoreMatrixList function to retrieve signal per base over windows in Granges object with targets BedGraph files. I know, and I am extensively using scoreMatrix options to load Granges, bigwig etc... but there are situations where loading a bedgraph into a Granges first is really memory inefficient. Would this be easy to implement?

Thanks a lot, generation is really cool!

Francesco

fgualdr avatar Feb 09 '22 11:02 fgualdr