fr3d-python
fr3d-python copied to clipboard
Non PEP-639 compliant syntax
https://github.com/BGSU-RNA/fr3d-python/blob/6e88eb7d40088bac32b2cca8211ee47e3a1019b7/setup.py#L11
The license file referenced above does not exist. Leads to
pip install git+https://github.com/BGSU-RNA/fr3d-python.git@master#egg=fr3d
Collecting fr3d
Cloning https://github.com/BGSU-RNA/fr3d-python.git (to revision master) to /private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-install-vg39no_p/fr3d_22d5b374ecce4c27af26df2dd279497f
Running command git clone --filter=blob:none --quiet https://github.com/BGSU-RNA/fr3d-python.git /private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-install-vg39no_p/fr3d_22d5b374ecce4c27af26df2dd279497f
Resolved https://github.com/BGSU-RNA/fr3d-python.git to commit 6e88eb7d40088bac32b2cca8211ee47e3a1019b7
Installing build dependencies ... done
Getting requirements to build wheel ... error
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> [60 lines of output]
/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `license` defined outside of `pyproject.toml` is ignored.
!!
********************************************************************************
The following seems to be defined outside of `pyproject.toml`:
`license = 'LICENSE.txt'`
According to the spec (see the link below), however, setuptools CANNOT
consider this value unless `license` is listed as `dynamic`.
https://packaging.python.org/en/latest/specifications/declaring-project-metadata/
To prevent this problem, you can list `license` under `dynamic` or alternatively
remove the `[project]` table from your file and rely entirely on other means of
configuration.
********************************************************************************
!!
_handle_missing_dynamic(dist, project_table)
/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
corresp(dist, value, root_dir)
Traceback (most recent call last):
File "/Users/anyango/Documents/local/orc/.venv/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
main()
File "/Users/anyango/Documents/local/orc/.venv/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/anyango/Documents/local/orc/.venv/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 118, in get_requires_for_build_wheel
return hook(config_settings)
^^^^^^^^^^^^^^^^^^^^^
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 325, in get_requires_for_build_wheel
return self._get_build_requires(config_settings, requirements=['wheel'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 295, in _get_build_requires
self.run_setup()
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 311, in run_setup
exec(code, locals())
File "<string>", line 5, in <module>
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/__init__.py", line 103, in setup
return distutils.core.setup(**attrs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 159, in setup
dist.parse_config_files()
File "/Users/anyango/Documents/local/orc/.venv/lib/python3.11/site-packages/_virtualenv.py", line 23, in parse_config_files
result = old_parse_config_files(self, *args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 627, in parse_config_files
pyprojecttoml.apply_configuration(self, filename, ignore_option_errors)
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/config/pyprojecttoml.py", line 67, in apply_configuration
return _apply(dist, config, filepath)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py", line 56, in apply
_apply_project_table(dist, config, root_dir)
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py", line 82, in _apply_project_table
corresp(dist, value, root_dir)
File "/private/var/folders/16/r6_c0c0x7_x5pcq7t35m48y00000gp/T/pip-build-env-gh6xqlvp/overlay/lib/python3.11/site-packages/setuptools/config/_apply_pyprojecttoml.py", line 183, in _license
_set_config(dist, "license", val["text"])
~~~^^^^^^^^
KeyError: 'text'
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
Python: 3.11
Pip: 23.2.1
command: pip install git+https://github.com/BGSU-RNA/fr3d-python.git