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Methylized nucleotides cannot be visualized

Open anhi opened this issue 10 years ago • 2 comments

Reported by akdehof on 10 Aug 39651794 19:33 UTC The FragmentDB has no rules for methylized nucleotides and therefore no Ribbon or Cartoon model can be generated.

Nasty looking remedy:

Change the nucleotides names manually, e.g., nucleotide named "5CM" to "C":

  • rightclick on the nucleotide in the Structures list => Properties => change the name to "C"
  • Build=>Add Hydrogens
  • in the Structures window rightclick on the molecule => Create Representation => e.g. Cartoon => by Residue Index

anhi avatar Feb 20 '15 01:02 anhi

Commented by akdehof on 5 Feb 40936098 16:16 UTC Deferred to 1.4.1

anhi avatar Feb 20 '15 06:02 anhi

Commented by Marcel on 14 Feb 41129947 02:09 UTC This can only be solved after the planned re-write of FragmentDB ...

anhi avatar Feb 20 '15 06:02 anhi