Austin Hartman

Hi @ViHammer (or @shaka87), this is useful to know. Any chance you could provide an example where downgrading to uwot v0.1.11 seems to be the only solution? I'm having trouble...

**Depth in the log will appear as** When long reads and short reads are available: ``` Calculating read depth (2020-07-30 20:36:55) -------------------------------------------- Short read depth: 54.48 Long read depth: 22.88...

Closing because the image-based spatial transcriptomics update in Seurat is now available on CRAN.

Closing because of non-response and I'm unable to reproduce.

Hi @Ikey2, could you please provide some code and your `sessionInfo()`?

Hi, thanks for pointing this out, I'll look into it. For now, you can load the reference with the following code: `SeuratData::InstallData("pbmcref")` followed by `ref

Hi, we don't currently provide an automated way to do this but the approach of mapping to two references and selecting the best cell type assignment for each cell seems...

Hi Sabrina, loading h5ad is often tricky since they don't always look the same. If possible, could you email your dataset or a reduced version of it to me at...

It looks like the installation of Seurat also failed. You may want to first begin by installing Seurat on your system with `install.packages("Seurat")` as it is listed as a suggested...

It's hard to know exactly what the issue is here especially since it's related to an Azimuth dependency rather than Azimuth itself, but my guess is that one or more...