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Python tools for ecological data analyses

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if isinstance(d2, DataFrame): d2 = np.array(d1) should be d2 = np.array(d2)

Hello, I've tried to install ecopy, but it gave me just this error. (After installing Cython, the issue persits) Processing c:\users\danie\python\ecopy Installing build dependencies ... done Getting requirements to build...

Hi all, My environment is Windows 10 + python 3.10.2 (64 bit), when I execute pip install ecopy, I got: ERROR: Could not find a version that satisfies the requirement...

The comb function is no longer available in the scipy.misc module in recent versions of SciPy. Instead, you should use the comb function from the scipy.special module.

Hi team ecopy I used the function $ ep.rarefy(data.frame, 'rarefy') and it return me the error: ecopy/diversity/rarefy.py:137: RuntimeWarning: invalid value encountered in divide rare_calc = np.sum(1 - comb(diff, size)/comb(N, size))...

Hi Ecopy team! Thank you for a wonderful package! I am however having difficulties installing the newest version(0.1.2.3). I use pip. I've tried to upgrade to 0.1.2.3 and simply installing...

First, when trying to run the CCA example in the documentation, I get an index error. `from scipy.special import comb import scipy.misc scipy.misc.comb = comb import ecopy as ep varespec...

When trying to transform matrices using the "normalize" method, I get the error: AttributeError: module 'numpy' has no attribute 'nansqrt' I know that numpy does have a 'sqrt' attribute, so...

```python from scipy.misc import comb --------------------------------------------------------------------------- ImportError Traceback (most recent call last) in ----> 1 from scipy.misc import comb ImportError: cannot import name 'comb' ``` `scipy.misc.comb(*args, **kwds)` comb is deprecated!...

Is there a way to get eigenvalues out of MDS or fraction of variances? If not, would it be possible to implement it?