KevinKune

Really appreciate your consistent effort in this work. I read your new paper yesterday and get shocked by CTMC results.

> > So the current situation is: > > > > 1. neutral 3-valence carbon and neutral 2-valence nitrogen appear in the valid valence lookup table likely due to a...

> We're hosting the raw files [here](https://bits.csb.pitt.edu/files/geom_raw/). The [directions in the readme ](https://github.com/Dunni3/FlowMol?tab=readme-ov-file#geom-drugs) point to this same location. These files are the starting point for our pipeline (`process_geom.py`). I will...

Hi, I downloaded the meta data from https://afdb-cluster.steineggerlab.workers.dev/?utm_source=chatgpt.com And I filter the meta data with the following cmd ``` awk -F'\t' '$4 > 256 && $4 80 {print $1}' \...

I tried this style of ids but it still returns nothing: ``` with open(f"{data_dir}/selected_rep_ids.txt") as f: ids = [f"AF-{line.strip()}-F1-model_v4.cif.gz" for line in f if line.strip()] ```