dmipy
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check dipy compatibility
With the recent update of dipy, many functions will not work. There are two possible solutions:
- Require an old version of dipy (suboptimal)
- Do a complete revision of the parts of dmipy where dipy is used (will take longer than expected)
What do we do @rutgerfick ?
Where are the spots you think it's broken? only median_otsu?
The python3 tests pass with dipy 1.0, so it must be something that's not in the tests.
For sure median_otsu
, but I think it will be better to go through the whole list of changed functions and just check if they are used anywhere. Although it's mostly streamlines-related functions, which makes the job much easier as they are never used in dmipy.
For the records, one case in which median_otsu
is used is discussed in #76 .