SCEVAN
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SCEVAN
when I was run
results <- SCEVAN::pipelineCNA(count_mtx_CR, sample = "CRPC",SUBCLONES = T,par_cores = 35)
,the following error occurred
[1] "found 4 subclones" percentage_cells_subsclone_1 percentage_cells_subsclone_2 percentage_cells_subsclone_3 0.3577128 0.3098404 0.2021277 percentage_cells_subsclone_4 0.1303191 [1] "Segmentation of subclone : 1" [1] "Segmentation of subclone : 2" [1] "Segmentation of subclone : 3" [1] "Segmentation of subclone : 4" Error in data.frame(..., check.names = FALSE) : (converted from warning) row names were found from a short variable and have been discarded
I checked my row name and column name, and there is no duplicate value
when I was run
results <- SCEVAN::pipelineCNA(count_mtx_CR, sample = "CRPC",SUBCLONES = F,par_cores = 35)
there is no error
How can I solve this error when "SUBCLONES = T"