Cannot find thermo path '/primer3_config/

[thomvesiri]

Hi,

I've tried running the docker image of vk primer, but so far without success. I keep getting the error in the title. The command I use is: docker run -it --rm -v $PWD:/data -v $PWD/home:/root/.genome andersenlab/vcf-kit vk primer snip --ref=./data/home/ref_genome_dir ./data/calls.vcf.gz

I've read multiple issues about this error, but so far none help my case. Due to the structure of my project I need to use the vcfkit docker image and can't download it with conda. Are there any other fixes I can try? If you need additional information, please let me know.

Thanks in advance, Thom