Biguri

Document zoom_image() operation order

2

If you zoom and offset in the same call to `zoom_image()` the amount of offset changes by some unknown/unexpected ratio. I suppose this is because operation order? e.g: ``` img.get_geometrical_info().print_info()...

NiftyRegf3d parameters docs.

6

As far as I understand there is no way for a user to link NiftyReg's `reg_f3d -h` docs (really, the only user-oriented docs they seem to have) to `sirf.Reg.NiftyRegf3d`'s `set_params`...

ImageData.zoom_image() size orders

14

I am trying to change the geometric info of an `sirf.STIR.ImageData` object. While doing some tests, I tried: ``` import sirf.STIR as stir stir.ImageData("myimage.hv") off=img.get_geometrical_info().get_offset() img.get_geometrical_info().print_info() img=img.zoom_image(offsets_in_mm=(0.0,0.0,-off[2])) img.get_geometrical_info().print_info() ``` Which...

Context: I have some image `img=sirf.stir.ImageData()` and some dvf `dvf=stir.Reg.NiftiImageData3DDisplacement()` I want to know the value of `dvf` at a particular `img` location `[x,y,z]`. something like `img[z,y,x]` `dvf[x,y,z,0,:]`. As these...

1. Installation instructions - Within the [installation instructions for MATLAB](https://github.com/CERN/TIGRE/blob/master/Frontispiece/MATLAB_installation.md) under the Step by Step Instructions > step 6 it suggests modifying line 125 mex .xml file but I found...