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Published 20 hours ago • verified publisher icon AllenInstitute

VB cells table has more experiments than experiments table

Open matchings opened this issue 4 years ago • 2 comments

AllenSDK 2.12.4

Checking the number of experiments in the ophys_cells_table and the ophys_experiment_table using .from_S3_cache gives a different number of experiments

image

Not sure why this is the case! Happy to help troubleshoot if needed.

matchings avatar Sep 27 '21 01:09 matchings

Just to add, since I ran into this issue too recently, these are the ophys experiments that are present in cell table : [875808238, 875808245, 875808247, 875808249, 875808251, 875808253,875808255], but are missing in ophys experiment table. I found them in ophys session table, and they belong to one imaging session from VIP mouse. Screen Shot 2021-10-22 at 11 41 34 AM

yavorska-iryna avatar Oct 22 '21 18:10 yavorska-iryna

I have come across the same issue here.

A little bit more detail:

  1. This is the only session with an empty([]) ophys_container_id across all ophys_sessions_table.
  2. OPHYS_6_images_A session was not re-taken, so the data collection from this mouse is incomplete.

jkim0731 avatar May 30 '22 22:05 jkim0731