Alexis Varin

icon company Inserm UMR Right icon location France icon location I am a research engineer using R and Python for transcriptomic analyses (scRNA-seq, bulk RNA-seq and microarray) and AI computer vision.

Results 2 issues of Alexis Varin

Question from tutorial and max.dataset in netVisual_bubble()

1 comment

Hi, First, thank you for your great package ! I have a question regarding the tutorial for multiple datasets and especially the `max.dataset` parameter in `netVisual_bubble()` In the tutorial, the...

netVisual_bubble() skips one of the LR pair

2 comment

Hello, I discovered one bug with `netVisual_bubble()` I did the following code : ``` pairLR.use.up = data.frame("interaction_name" = "MIF_CD74_CXCR4") netVisual_bubble(cellchat, pairLR.use = pairLR.use.up, sources.use = 4, targets.use = c(1:31), comparison...