Abhishaike Mahajan

Exactly as in the title. For example, if I did `pipeline.rotate(probability=0.3, max_left_rotation=5, max_right_rotation=5)` Is there any way for me to find out whether that rotation really did happen for an...

OOM on AF DB proteins?

2

Creating a binder for this protein: https://alphafold.ebi.ac.uk/entry/Q8W3K0 and I'm getting this error both on T4's and A100's: This error makes sense, but I'm confused as to how a protein that...

It currently seems like the input custom template path is applied for every chain in the input. https://github.com/sokrypton/ColabFold/blob/main/colabfold/batch.py#L768 ``` if custom_template_path is not None: template_paths = {} for index in...

Can I import Colabfold functions with this?

1

**What is your question?** I'd like to import a few functions with colabfold, and would like to also use this script, but it doesn't seem like my import managers are...

Generating template error

4

I'd like to get only the MSA + template, but am running into issues with the template features upon using `get_msa_and_templates`. It works perfectly fine when `use_templates` is `False`, but...