Hao Hou

Yep, that works correctly on all platforms. But you know I still kind of like this crate because it has way less dependency. (Also for rusttype). Thanks for the information!

Thanks for reporting the issue. If you can provide a smaller bam that would be great! Thanks!

Hi, just checked the BAM file, it seems the alignments mapping qualities are blow the default minimal mapping quality threshold. You can add `-q 0` to the command arguments you...

Hi @petersudmant, thanks for reporting this bug. Just pushed a fix to the master branch, it would be really helpful if you can confirm the fix actually works.

Hi @darked89 , I believe this is dup to issue #54 and is already fixed in the latest release. I believe d4tools on bioconda is updated already, please check if...

Hi Fengyuan, Thanks for reporting this. I just fixed this bug in master. It would be nice if you can confirm the bug is actually fixed. Thanks!

Yep, we are going to publish a newer version after the recent work completes. At this time, you probably can use the the published version - as the file specification...

``` Do you have to use C++ istream? Why not use the hFILE APIs instead? ``` @lh3 The requirement is a little bit complicated. Since the bedtools actually detects file...

Hi, I think the issue is the input file `down2.txt` contains invalid record: ``` NW_021821572.1 0 0 ``` And this causes the bin tree failed to lookup the bin.

It seems bedtools expecting either SVLEN or END, but the VCF doesn't have neither of them. I suspect the VCF is used to represent per-base records, thus we could potentially...