Additional improvements to adata_to_multivec_zarr function
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keller-mark
opened this issue 1 year ago
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Use all chromosomes present in input dataframe.
Emit warning about chromosomes that are contained in assembly but not in the input dataframe to catch cases in which users are using wrong assembly (and chr prefix differences).
Reindex in_bins_df prior to for loop https://github.com/vitessce/vitessce-python/blob/83b1411f170a96394e6e5e05f5970ca1c0e0dd0c/vitessce/data_utils/multivec.py#L88 to ensure the index values are integers in range(in_bins_df.shape[0])