genomics topic

List genomics repositories

biojava

581
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:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.

GenomeWorks

275
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77
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SDK for GPU accelerated genome assembly and analysis

goleft

208
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24
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goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary

PostGUI

429
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51
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A React web application to query and share any PostgreSQL database.

galaxy

1.3k
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966
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Data intensive science for everyone.

hail

944
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238
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Cloud-native genomic dataframes and batch computing

GWA_tutorial

776
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313
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A comprehensive tutorial about GWAS and PRS

intermine

249
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351
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A powerful open source data warehouse system

msprime

168
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84
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Simulate genealogical trees and genomic sequence data using population genetic models

peddy

129
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39
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genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF