computational-biology topic

List computational-biology repositories

hypeR

72
Stars
11
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An R Package for Geneset Enrichment Workflows

NeoDTI

72
Stars
33
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NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions

CompBioDatasetsForMachineLearning

141
Stars
23
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A Curated List of Computational Biology Datasets Suitable for Machine Learning

Chaste

116
Stars
55
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Chaste - Cancer Heart And Soft Tissue Environment - main public repository.

BioSimSpace

76
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19
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Code and resources for the EPSRC BioSimSpace project.

GeoDiff

302
Stars
68
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Implementation of GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation (ICLR 2022).

bio-phylo

16
Stars
6
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Bio::Phylo - Phyloinformatic analysis using Perl

cell2cell

55
Stars
12
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User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins

lantern

33
Stars
5
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Interpretable genotype-phenotype landscape modeling