computational-biology topic

List computational-biology repositories

PteraSoftware

158
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Ptera Software is a fast, easy-to-use, and open-source software package for analyzing flapping-wing flight.

iodata

120
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44
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Python library for reading, writing, and converting computational chemistry file formats and generating input files.

protein-transformer

106
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Predicting protein structure through sequence modeling

metaGEM

189
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41
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:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

PyFeat

87
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30
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A Python-based Effective Feature Generation Tool from DNA, RNA, and Protein Sequences

souporcell

148
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42
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Clustering scRNAseq by genotypes

Clair

102
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12
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Clair: Exploring the limit of using deep neural network on pileup data for germline variant calling

RIDDLE

89
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16
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Race and ethnicity Imputation from Disease history with Deep LEarning