bioinformatics-pipeline topic
ilus
A handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
czid-web
Infectious Disease Sequencing Platform
gubbins
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
too-many-cells
Cluster single cells and analyze cell clade relationships with colorful visualizations.
methylpy
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
MToolBox
A bioinformatics pipeline to analyze mtDNA from NGS data
positive-selection
Scripts and procedures for detecting positively selected genes and codons in primates
tiptoft
Predict plasmids from uncorrected long read data
BioQueue
A novel pipeline framework to accelerate bioinformatics analysis
meta-proteome-analyzer
MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.