bioinformatics-analysis topic
snakemake-wrappers
:snake: Snakemake wrappers for bioinformatics.
ChronQC
Manuscript describing ChronQC is now available online in Bioinformatics
NAM-genomes
Detailed bioinformatics scripts and methods used in the NAM genome paper.
webservice-clients
A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs
ReactomePy
Explore biomolecular pathways in Reactome from the command-line or a Python script
CodonU
A python project for analysis of codon usage for gene or genome analysis
pMoSS
pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-validation. Exploits the dependence on the sample size to character...
PipeRNAseq
A comprehensive pipeline for RNAseq data analysis
CIARA
CIARA (Cluster Independent Algorithm for the identification of markers of RAre cell types) is an R package that identifies potential markers of rare cell types looking at genes whose expression is co...
workflows
CWL based Bioinformatics Workflows