caret-machine-learning
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bridge regression model extremely slow
Its extremely slow. glm or pls run in 0.5 seconds (parallel). dont try sequential, only finishes in ages. caret_6.0-70
method <- c( "bridge")
# -------------------------------------------------------------------------
# FIRST sequential code (not parallel one CPU core):
# -------------------------------------------------------------------------
require(caret); data(BloodBrain); set.seed(123)
#fit1 <- train(bbbDescr, logBBB, method); fit1
# -------------------------------------------------------------------------
# SECOND parallel register 4 cores (no worries if you only have 2)
# train the caret model in parallel
# -------------------------------------------------------------------------
library(doParallel); cl <- makeCluster(4); registerDoParallel(cl)
require(caret); data(BloodBrain); set.seed(123)
fit1 <- train(bbbDescr, logBBB, method); fit1
stopCluster(cl); registerDoSEQ();
### END