caret-machine-learning
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enpls regression chokes on cars
caret_6.0-70 and R version 3.3.1
# knn works
method <- c("enpls")
# -------------------------------------------------------------------------
# FIRST sequential code (not parallel one CPU core):
# -------------------------------------------------------------------------
require(caret); data(BloodBrain); set.seed(123)
fit1 <- train(bbbDescr, logBBB, method); fit1
# -------------------------------------------------------------------------
# SECOND parallel register 4 cores (no worries if you only have 2)
# train the caret model in parallel
# -------------------------------------------------------------------------
library(doParallel); cl <- makeCluster(4); registerDoParallel(cl)
require(caret); data(BloodBrain); set.seed(123)
fit1 <- train(bbbDescr, logBBB, method); fit1
stopCluster(cl); registerDoSEQ();
### END
errors
Something is wrong; all the RMSE metric values are missing:
RMSE Rsquared
Min. : NA Min. : NA
1st Qu.: NA 1st Qu.: NA
Median : NA Median : NA
Mean :NaN Mean :NaN
3rd Qu.: NA 3rd Qu.: NA
Max. : NA Max. : NA
NA's :1 NA's :1
Error in train.default(bbbDescr, logBBB, method) : Stopping
In addition: There were 26 warnings (use warnings() to see them)
--
Error in train.default(bbbDescr, logBBB, method) : Stopping
In addition: Warning message:
In nominalTrainWorkflow(x = x, y = y, wts = weights, info = trainInfo, :
There were missing values in resampled performance measures.