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Published 20 hours ago • verified publisher icon tangerzhang

Genome assembly of aneuploid plant species

Open sandipmkale opened this issue 3 years ago • 1 comments

Hello, i am working on a plant species which is highly heterozygous and contains 3 trisomic chromosomes. We have both HiFi and HiC data. Is it possible to generate phased assembly using all hic pipeline.

Thanks alot

Sandip

sandipmkale avatar Mar 26 '22 20:03 sandipmkale

Yes, It should be OK to generate the phased assembly using ALLHiC pipeline.

tangerzhang avatar Mar 27 '22 06:03 tangerzhang