sleap icon indicating copy to clipboard operation
sleap copied to clipboard

Add codespell config, workflow and get it to fix some typos it finds

Open yarikoptic opened this issue 1 year ago • 3 comments

Description

codespell is great, and it can help to keep your code typos free.

Types of changes

  • [ ] Bugfix
  • [ ] New feature
  • [ ] Refactor / Code style update (no logical changes)
  • [ ] Build / CI changes
  • [ ] Documentation Update
  • [x] Other (explain): typos fixed, primarily in the comments and strings but also in some test paths (see if tests got affected) etc.

Outside contributors checklist

  • [x] Review the guidelines for contributing to this repository
  • [ ] Read and sign the CLA and add yourself to the authors list: I would need more instructions on how to sign and either worth adding to authors list
  • [x] Make sure you are making a pull request against the develop branch (not main). Also you should start your branch off develop
  • [ ] Add tests that prove your fix is effective or that your feature works
  • [ ] Add necessary documentation (if appropriate)

Thank you for contributing to SLEAP!

:heart:

Summary by CodeRabbit

  • Documentation

    • Corrected various spelling errors across multiple documentation files for improved clarity and readability.
    • Updated CLI documentation to fix typos and enhance command descriptions.
  • Bug Fixes

    • Fixed typographical errors in user interface text and error messages to ensure accurate communication.
  • Chores

    • Implemented a spell-check workflow using GitHub Actions to maintain codebase quality.
    • Configured codespell to ignore certain files and patterns, reducing false positives during spell checks.
  • Style

    • Standardized comments and docstrings throughout the codebase for consistency.
  • Tests

    • Adjusted comments in test files for accuracy and to reflect correct behavior.

yarikoptic avatar Nov 28 '23 00:11 yarikoptic

Walkthrough

The changes encompass a wide range of typographical error corrections across various documentation, comments, and error messages within the codebase. Additionally, a GitHub Actions workflow for spell checking using codespell has been introduced, ensuring future contributions are free from such mistakes. Minor clarifications in help texts and comments have been made to improve understanding and readability.

Changes

File Path Change Summary
.codespellrc,
.github/workflows/codespell.yml
Added codespell configuration and GitHub Actions workflow for spell checking.
docs/CONTRIBUTING.md,
docs/guides/cli.md,
docs/guides/gui.md,
docs/installation.md,
docs/notebooks/...,
pypi_requirements.txt,
sleap/gui/app.py,
sleap/gui/commands.py,
sleap/gui/learning/dialog.py,
sleap/gui/learning/runners.py,
sleap/gui/overlays/tracks.py,
sleap/gui/widgets/video.py,
sleap/gui/widgets/views.py,
sleap/instance.py,
sleap/io/convert.py,
sleap/io/dataset.py,
sleap/io/format/ndx_pose.py,
sleap/io/video.py,
sleap/nn/architectures/resnet.py,
sleap/nn/config/optimization.py,
sleap/nn/data/resizing.py,
sleap/nn/inference.py,
sleap/nn/paf_grouping.py,
sleap/nn/peak_finding.py,
sleap/nn/tracking.py,
sleap/nn/training.py,
sleap/rangelist.py,
sleap/skeleton.py,
tests/gui/learning/test_dialog.py,
tests/gui/test_commands.py,
tests/info/test_h5.py,
tests/nn/test_inference.py,
tests/test_message.py
Corrected typographical errors and clarified comments and documentation.

"In the burrow of the code, where the characters hop,
A spell was cast, and typos did stop.
🐇 With each keystroke, and every line,
The rabbit ensured the words would align."

Thank you for using CodeRabbit. We offer it for free to the OSS community and would appreciate your support in helping us grow. If you find it useful, would you consider giving us a shout-out on your favorite social media?

Share

Tips

Chat

There are 3 ways to chat with CodeRabbit's AI:

  • Review comments: Directly reply to a review comment made by CodeRabbit. Example:
    • I pushed a fix in commit <commit_id>.
    • Generate unit-tests for this file.
  • Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
    • @coderabbitai generate unit tests for this file.
    • @coderabbitai modularize this function.
  • PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
    • @coderabbitai generate interesting stats about this repository from git and render them as a table.
    • @coderabbitai show all the console.log statements in this repository.
    • @coderabbitai read src/utils.ts and generate unit tests.
    • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid.
    • @coderabbitai read the files in the src/scheduler package and generate README in the markdown format.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (invoked as PR comments)

  • @coderabbitai pause to pause the reviews on a PR.
  • @coderabbitai resume to resume the paused reviews.
  • @coderabbitai review to trigger a review. This is useful when automatic reviews are disabled for the repository.
  • @coderabbitai resolve resolve all the CodeRabbit review comments.
  • @coderabbitai help to get help.

Additionally, you can add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.

CodeRabbit Configration File (.coderabbit.yaml)

  • You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
  • The JSON schema for the configuration file is available here.
  • If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/coderabbit-overrides.v2.json

CodeRabbit Discord Community

Join our Discord Community to get help, request features, and share feedback.

coderabbitai[bot] avatar Nov 28 '23 00:11 coderabbitai[bot]

Codecov Report

Attention: 2 lines in your changes are missing coverage. Please review.

Comparison is base (14b5b78) 73.38% compared to head (fc06c95) 73.38%.

Files Patch % Lines
sleap/gui/app.py 0.00% 1 Missing :warning:
sleap/nn/training.py 0.00% 1 Missing :warning:
Additional details and impacted files
@@             Coverage Diff             @@
##           develop    #1610      +/-   ##
===========================================
- Coverage    73.38%   73.38%   -0.01%     
===========================================
  Files          134      134              
  Lines        24064    24064              
===========================================
- Hits         17660    17659       -1     
- Misses        6404     6405       +1     

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.

codecov[bot] avatar Nov 28 '23 17:11 codecov[bot]