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Adding a small tutorial how to use SBML models with BayesFlow

Open arrjon opened this issue 1 year ago • 2 comments

I have included a brief tutorial on how to utilize an SBML model with BayesFlow (the SBML format is very often used in computational systems biology). In the other tutoirals, users need to define and simulate the model manually. However, in this tutorial, we demonstrate the process of loading a model from the BioModels database, utilizing a simulator designed to handle SBML data format, and showcasing the seamless integration with BayesFlow. I hope you find it useful :)

arrjon avatar Mar 09 '24 18:03 arrjon

That's fantastic, Jonas! Thanks!

When I try to view the notebook with the GitHub renderer, I get:

Invalid Notebook 'execution_count' is a required property Using nbformat v5.9.2 and nbconvert v7.16.1

I will try to open the notebook from my dev PC later.

stefanradev93 avatar Mar 09 '24 20:03 stefanradev93

I just rerun the notebook and pushed it again. At least I can view it with the GitHub renderer

arrjon avatar Mar 11 '24 09:03 arrjon