data-multi-subject
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spine-generic
Multi-subject data for the Spine Generic project
Hi there! I am working on a very preliminary [small tool](https://github.com/UNFmontreal/forbids) for continuous multi-site/multi-vendor protocol compliance check, and the spine-generic dataset came to my mind as one of the best...
The [spine-generic](https://github.com/spine-generic/data-multi-subject) dataset is being increasingly downloaded, which comes at a cost. For example, the cost for 2023 was 478$, which is not negligible (cost per month below): ~~~ >>>...
There are 15 `sub-tokyo` subjects; however, there's *actually* only 5 real subjects involved, each scanned on three different MRI scanners. For example: ``` u108545@joplin:~/data-multi-subject$ ls sub-tokyo*01 sub-tokyo750w01: anat dwi sub-tokyoIngenia01:...
## Description Right now, the contrast `flip-1_mt-off_MTS` is not included in `derivatives/data_preprocessed/` since there are not associated labels to it. If that changes, it could be added.
## Description This PR adresses #156 and #157 mainly and cleans up the datasets. Th main changes include: 1. Adds preprocessed images with entity `space-other` in folder `derivatives/data_preprocessed`: (#156, #144...
This PR adds dorsal C2-C8 rootlets labels for T2w images of 24 subjects. The labels were part of the "[D5 dataset](https://github.com/ivadomed/model-spinal-rootlets/blob/main/training/dataset_creation/D5.tsv)" used for training and testing of the "[M5 model](https://github.com/ivadomed/model-spinal-rootlets/pull/23#issuecomment-1836305457)":...
These are the PAM50 registered labels supplied by @yw7 in #155. I split the upload into two commits: 1. Some of the files are completely new, so there's no conflict....
Hello team, I have PAM50 registered labels currently in a private google drive [data-multi-subject_PAM50_seg.zip](https://drive.google.com/file/d/1Sq38xLHnVxhLr0s1j27ywbeshNUjo3IP) that are used to train the model for [TotalSegmentatorMRI project](https://github.com/neuropoly/totalsegmentator-mri). How can I upload those labels...
## Description Since we have now [clarified ](https://intranet.neuro.polymtl.ca/data/dataset-curation.html#building-the-derivatives-datasets)the naming of the labels in the derivatives, we need to update the derivatives name in spine generic ## Suggestions * `sub-amu01_T2star_seg-manual.nii.gz` -->...
## Description Since the labels in the derivatives were generated from preprocessed images (reorientation, resampling, etc.), to avoide confusion and issues such as #153 and repeating these steps, we propose...
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Multi-subject data for the Spine Generic project