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DestVI changed l1 loss. Expected proportions
Uses proportions computed in other deconvolution method to infer cell activation state of those cells. Application activation for e.g. Cell2Location results. L1 loss changed. Still in discussion. Optional obsm field.
Codecov Report
Attention: 23 lines in your changes are missing coverage. Please review.
Comparison is base (
638745a) 89.18% compared to head (8aab83f) 88.94%. Report is 1 commits behind head on main.
| Files | Patch % | Lines |
|---|---|---|
| scvi/module/_mrdeconv.py | 63.26% | 18 Missing :warning: |
| scvi/model/_destvi.py | 81.81% | 4 Missing :warning: |
| scvi/data/fields/_arraylike_field.py | 80.00% | 1 Missing :warning: |
Additional details and impacted files
@@ Coverage Diff @@
## main #1591 +/- ##
==========================================
- Coverage 89.18% 88.94% -0.25%
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Files 152 152
Lines 12482 12536 +54
==========================================
+ Hits 11132 11150 +18
- Misses 1350 1386 +36
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@cane11 any reason to keep this open?
@martinkim0 It's the version of destVI we are using for Curio data (other sparsity regularization). Can you have a pass?