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Published 20 hours ago • verified publisher icon rezacsedu

Error during execution

Open mosaddekhussain opened this issue 3 years ago • 0 comments

Hi.

I have tried to execute the codes but getting the following error messages. If you kindly tell me the exact version of python you executed the codes and how to overcome the following error messages. Also if you kindly check whether the final version of your codes are uploaded in the github or not. Kindly help.

file_amount.csv is created. submitter_id_to_case_uuid.json is created. Traceback (most recent call last): File "main_download.py", line 43, in main() File "main_download.py", line 39, in main create_dataset(dataset=DATASET, location=MAIN_LOCATION) File "/home/saheb/Preprocessing/preprocessing_main.py", line 105, in create_dataset pathology_receptor() File "/home/saheb/Preprocessing/preprocess_clinical.py", line 758, in pathology_receptor new_dict[meta_clinical[case_id_column]]['er_percentage'] = root[1].find('brca_shared:er_level_cell_percentage_category', ns).text AttributeError: 'NoneType' object has no attribute 'text'

mosaddekhussain avatar Dec 27 '21 15:12 mosaddekhussain