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classifying human DNA sequence and random ATCG sequences, using keras CNN

deep_learning_DNA

Classifying human DNA sequence and random ATCG sequences, using keras CNN

This is a small tutorial for my lab members, on how to apply deep learning technology in analyzing DNA genome sequences. I have create an ipython notebook for the analysis pipeline. To my surprise, the simple network achieves 99% accuracy in classifying DNA sequences from random generate sequences. A deep neural newtork may probably learn much more from our genome than us.

(the cute image was from Rolling wild http://www.rollinwild.com/)