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ENH: added 'hsvs' option to 5ttgen + mrtransform fix

Open teanijarv opened this issue 1 year ago • 1 comments
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  • added Hybrid Surface and Volume Segmentation ('hsvs') option to the 5TT image generation class
  • removed the in_file existing requirement (exists=True -> exists=False) for 5ttgen because hsvs requires a directory not a file as input
  • changed '-inverse' parameter location from 1 to 2 in mrtransform class (to make it possible to insert it in the command together with other parameters)

teanijarv avatar Feb 20 '24 08:02 teanijarv

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 63.15%. Comparing base (42302ed) to head (7fc44fd). Report is 7 commits behind head on master.

Additional details and impacted files
@@           Coverage Diff           @@
##           master    #3630   +/-   ##
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  Coverage   63.15%   63.15%           
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  Files         308      308           
  Lines       40825    40825           
  Branches     5656     5656           
=======================================
  Hits        25781    25781           
  Misses      14031    14031           
  Partials     1013     1013           

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codecov[bot] avatar Feb 28 '24 08:02 codecov[bot]