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NIPYPE Matlab issue
Summary
Anytime I do anything related to SPM I have this error showing along with the typical Matlab beep sound error:
stty: 'standard input': Inappropriate ioctl for device
Expected behavior
No error message
How to replicate the behavior
I'm using a Singularity image made with Neurodocker with: -Debian:stretch -SPM12 r7771 -Matlab compiler R2010 (MCR)
Script/Workflow details
matlab_cmd = '/opt/spm12-r7771/run_spm12.sh /opt/matlabmcr-2010a/v713/ script'
spm.SPMCommand.set_mlab_paths(matlab_cmd=matlab_cmd, use_mcr=True)
Error message re-appear anytime I do anything SPM related. Although it does not seem to crash or prevent computation.
this is an issue with the script used to call matlab not on the end of nipype I believe. If you google the error you will find a ton of stuff come up