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VDM phase_map loading error realign unwarp
trafficstars
Having an issue loading the vdm file into spm. The single vdm file is not getting auto-populated { } for spm batch to read the vdm in the jobfile. Therefore, the vdm file is not being used in reference for realign and unwarping.
code: realignUnwarp.inputs.phase_map = 'file'
Actual behavior
jobs{1}.spm.spatial.realignunwarp.data.pmscan = 'file';
Expected behavior
jobs{1}.spm.spatial.realignunwarp.data.pmscan = {'file'};
- spm 12 batch editor needs these brackets to read the file
I suspect this may just be a version issue, with the Nipype code and version I'm running working with SPM8 and now that I'm running SPM12 the file is not being read in properly.