funcscan icon indicating copy to clipboard operation
funcscan copied to clipboard

Feature request: enable --clusterhmmer, --fullhmmer, and --tigrfam options in the antiSMASH module

Open yusukepocky opened this issue 1 month ago • 1 comments

Description of feature

Dear funcscan developers,

I was wondering why the antiSMASH module in the funcscan pipeline doesn’t include the --clusterhmmer, --fullhmmer, or --tigrfam options. These options are quite useful to verify whether the detected biosynthetic enzymes are functionally intact, and they provide actual domain positions and scores in CDSs. Since many biosynthetic enzymes are multi-domain proteins, I think it would be more informative if we can enable those options in funcscan!

yusukepocky avatar Oct 27 '25 13:10 yusukepocky