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When loading NegBioParser() the session crashes

Open pythonista0801 opened this issue 3 years ago • 1 comments

I have learnt about NegBio from Coursera and tried to run the code on Colab. I have installed NegBio with pip and imported the required modules including NegBioParser(). However, when I try to load parser = NegBioParser() the session crashes, the reason in logs was first NO CUDA detected. I fixed it and switched to GPU runtime. After loading all dependencies and loading parser, the session crashed again... it gives no message what's wrong, I can just see some logs such as : gzip: stdout: Broken pipe. OR 2022-07-13 17:54:43.937715: W tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:39] Overriding allow_growth setting because the TF_FORCE_GPU_ALLOW_GROWTH environment variable is set. Original config value was 0. and then Kernel restarted

pythonista0801 avatar Jul 13 '22 17:07 pythonista0801

I'm having the same problem. Has anyone found a solution?

jwaldor avatar Dec 09 '22 14:12 jwaldor